U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LV_25_samp_4434_15. Sondu Miriu_2023

Identifiers
BioSample: SAMN41711829; Sample name: CAIOZW01 sp._LV_25_15. Sondu Miriu_2023
Organism
Acidobacteriota bacterium
cellular organisms; Bacteria; Pseudomonadati; Acidobacteriota; unclassified Acidobacteriota
Package
MIMAG: metagenome-assembled genome, water; version 6.0
Attributes
isolatesamp_4434_concoct_1189
isolation sourcelake water
collection date2023-05-29
depth1m
derived fromSAMN41659694
sample typemetagenomic assembly
metagenome sourcefreshwater metagenome
broad-scale environmental contextlarge freshwater lake biome [ENVO:00000891]
local-scale environmental contextLake [ENVO:00000020]
environmental mediumwater [ENVO:00002006]
geographic locationKenya:Lake Victoria
latitude and longitude0.3185 S 34.75242 E
collection method Van dorn collection
conductivity142.2(uS/cm)
dissolved oxygen5.95mg/L
nitrate42.45 (ug/L)
pH8.5
sample collection device or methodVan dorn
sample storage temperature-80 degree C
size fraction selected0.22 micron
soluble reactive phosphorus21.45(ug/L)
temperature26.56degree C
total depth of water column3.7m
total dissolved nitrogen1524(ug/L)
total nitrogen1690 (ug/L)
total phosphorus176 (ug/L)
turbidity48.1NTU
metagenomic1
environmental-sample1
geo_loc_meLake Victoria
Completeness(%)75.99
Contamition (%)8.02
Strain Heterogeneity (%)16.67
Size (Mbp)3.784348
No. Of Contigs1621
GC_Content (%)59.9
N502652
filesamp_4434_concoct_1189
Description

Sondu Miriu

Keywords: GSC:MIxS;MIMAG:6.0

Submission
University of Michigan, Lauren Hart; 2024-06-06
Accession:
SAMN41711829
ID:
41711829

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center