LV_26_samp_4435_17. Southern Mid-Gulf_2023

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Identifiers: BioSample: SAMN41711886; Sample name: UBA952 sp._LV_26_17. Southern Mid-Gulf_2023

Organism: Crocinitomicaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Crocinitomicaceae; unclassified Crocinitomicaceae

Attributes

isolate	samp_4435_VAMB_793
isolation source	lake water
collection date	2023-05-29
depth	1m
derived from	SAMN41659695
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.2572 S 34.70315 E
collection method	Van dorn collection
conductivity	144.2(uS/cm)
dissolved oxygen	5.17mg/L
nitrate	45.05 (ug/L)
pH	8.1
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	12.15(ug/L)
temperature	26.09degree C
total depth of water column	6.4m
total dissolved nitrogen	835(ug/L)
total nitrogen	619 (ug/L)
total phosphorus	60.65 (ug/L)
turbidity	42.8NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	91.46
Contamition (%)	21.11
Strain Heterogeneity (%)	32.14
Size (Mbp)	2.221077
No. Of Contigs	1444
GC_Content (%)	36.4
N50	1975
file	samp_4435_VAMB_793