LV_27_samp_4436_18. Awach River Mouth_2023

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Identifiers: BioSample: SAMN41711901; Sample name: Fonsibacter sp._LV_27_18. Awach River Mouth_2023

Organism: Candidatus Fonsibacter sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Candidatus Pelagibacterales; Candidatus Pelagibacterales incertae sedis; Candidatus Fonsibacter; unclassified Candidatus Fonsibacter

Attributes

isolate	samp_4436_VAMB_666
isolation source	lake water
collection date	2023-05-30
depth	1m
derived from	SAMN41659696
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.3471 S 34.64945 E
collection method	Van dorn collection
conductivity	142.5(uS/cm)
dissolved oxygen	4.38mg/L
nitrate	27.1 (ug/L)
pH	7.1
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	22.05(ug/L)
temperature	29.7degree C
total depth of water column	3.2m
total dissolved nitrogen	745.5(ug/L)
total nitrogen	2765 (ug/L)
total phosphorus	296 (ug/L)
turbidity	31.9NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	73.81
Contamition (%)	22.7
Strain Heterogeneity (%)	17.02
Size (Mbp)	8.589764
No. Of Contigs	17923
GC_Content (%)	46.7
N50	485
file	samp_4436_VAMB_666