LV_29_samp_4438_20. Ingra_2023

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Result Filters

Identifiers: BioSample: SAMN41711903; Sample name: UBA954 sp._LV_29_20. Ingra_2023

Organism: Betaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; unclassified Betaproteobacteria

Attributes

isolate	samp_4438_concoct_811
isolation source	lake water
collection date	2023-05-30
depth	1m
derived from	SAMN41659698
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.3505 S 34.45655 E
collection method	Van dorn collection
conductivity	138.5(uS/cm)
dissolved oxygen	5.99mg/L
nitrate	ND
pH	8.7
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	10.6(ug/L)
temperature	28.4degree C
total depth of water column	10.3m
total dissolved nitrogen	252.75(ug/L)
total nitrogen	463 (ug/L)
total phosphorus	90.5 (ug/L)
turbidity	27.7NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	79.42
Contamition (%)	4.8
Strain Heterogeneity (%)	52.94
Size (Mbp)	1.651109
No. Of Contigs	673
GC_Content (%)	57.2
N50	3003
file	samp_4438_concoct_811