LV_29_samp_4438_20. Ingra_2023

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Identifiers: BioSample: SAMN41711910; Sample name: SXXK01 sp._LV_29_20. Ingra_2023

Organism: Planctomycetaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; PVC group; Planctomycetota; Planctomycetia; Planctomycetales; Planctomycetaceae; unclassified Planctomycetaceae

Attributes

isolate	samp_4438_VAMB_77
isolation source	lake water
collection date	2023-05-30
depth	1m
derived from	SAMN41659698
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.3505 S 34.45655 E
collection method	Van dorn collection
conductivity	138.5(uS/cm)
dissolved oxygen	5.99mg/L
nitrate	ND
pH	8.7
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	10.6(ug/L)
temperature	28.4degree C
total depth of water column	10.3m
total dissolved nitrogen	252.75(ug/L)
total nitrogen	463 (ug/L)
total phosphorus	90.5 (ug/L)
turbidity	27.7NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	81.65
Contamition (%)	4.23
Strain Heterogeneity (%)	66.67
Size (Mbp)	5.693506
No. Of Contigs	5453
GC_Content (%)	58.7
N50	1344
file	samp_4438_VAMB_77