LV_32_samp_4441_23. Sikli_2023

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Result Filters

Identifiers: BioSample: SAMN41711940; Sample name: F1-60-MAGs027 sp016870295_LV_32_23. Sikli_2023

Organism: Actinomycetota bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; unclassified Actinomycetota

Attributes

isolate	samp_4441_VAMB_79
isolation source	lake water
collection date	2023-05-31
depth	1m
derived from	SAMN41659701
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.4294 S 34.364 E
collection method	Van dorn collection
conductivity	143.7(uS/cm)
dissolved oxygen	7.16mg/L
nitrate	4.505 (ug/L)
pH	8.6
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	25.7(ug/L)
temperature	26.32degree C
total depth of water column	11.8m
total dissolved nitrogen	406(ug/L)
total nitrogen	816 (ug/L)
total phosphorus	93 (ug/L)
turbidity	27.9NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	80.64
Contamition (%)	16.52
Strain Heterogeneity (%)	76.92
Size (Mbp)	1.980661
No. Of Contigs	1636
GC_Content (%)	62
N50	1577
file	samp_4441_VAMB_79