LV_34_samp_4443_25. Mbita East_2023

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Result Filters

Identifiers: BioSample: SAMN41711979; Sample name: SYAR01 sp._LV_34_25. Mbita East_2023

Organism: Alphaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; unclassified Alphaproteobacteria

Attributes

isolate	samp_4443_VAMB_952
isolation source	lake water
collection date	2023-06-01
depth	1m
derived from	SAMN41659703
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.4155 S 34.20972 E
collection method	Van dorn collection
conductivity	146.3(uS/cm)
dissolved oxygen	8.68mg/L
nitrate	ND
pH	7.4
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	12.375(ug/L)
temperature	25.26degree C
total depth of water column	11.3m
total dissolved nitrogen	204.75(ug/L)
total nitrogen	265 (ug/L)
total phosphorus	50.5 (ug/L)
turbidity	13.5NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	87.61
Contamition (%)	3.85
Strain Heterogeneity (%)	25
Size (Mbp)	1.231777
No. Of Contigs	644
GC_Content (%)	31.6
N50	2526
file	samp_4443_VAMB_952