LV_37_samp_4446_28. Bondo_2023

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Identifiers: BioSample: SAMN41712094; Sample name: Vulcanococcus sp016882415_LV_37_28. Bondo_2023

Organism: Vulcanococcus sp.
cellular organisms; Bacteria; Bacillati; Cyanobacteriota/Melainabacteria group; Cyanobacteriota; Cyanophyceae; Synechococcales; Synechococcaceae; Vulcanococcus; unclassified Vulcanococcus

Attributes

isolate	samp_4446_concoct_758
isolation source	lake water
collection date	2023-06-02
depth	1m
derived from	SAMN41659706
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.2683 S 34.1481 E
collection method	Van dorn collection
nitrate	ND
pH	9
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	4.87(ug/L)
temperature	degree C
total depth of water column	30m
total dissolved nitrogen	250(ug/L)
total nitrogen	1400 (ug/L)
total phosphorus	133 (ug/L)
turbidity	NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	87.98
Contamition (%)	11.32
Strain Heterogeneity (%)	66.07
Size (Mbp)	1.989985
No. Of Contigs	629
GC_Content (%)	69.6
N50	3812
file	samp_4446_concoct_758