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LV_37_samp_4446_28. Bondo_2023

Identifiers
BioSample: SAMN41712105; Sample name: UBA964 sp._LV_37_28. Bondo_2023
Organism
Gammaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; unclassified Gammaproteobacteria
Package
MIMAG: metagenome-assembled genome, water; version 6.0
Attributes
isolatesamp_4446_VAMB_280
isolation sourcelake water
collection date2023-06-02
depth1m
derived fromSAMN41659706
sample typemetagenomic assembly
metagenome sourcefreshwater metagenome
broad-scale environmental contextlarge freshwater lake biome [ENVO:00000891]
local-scale environmental contextLake [ENVO:00000020]
environmental mediumwater [ENVO:00002006]
geographic locationKenya:Lake Victoria
latitude and longitude0.2683 S 34.1481 E
collection method Van dorn collection
nitrateND
pH9
sample collection device or methodVan dorn
sample storage temperature-80 degree C
size fraction selected0.22 micron
soluble reactive phosphorus4.87(ug/L)
temperaturedegree C
total depth of water column30m
total dissolved nitrogen250(ug/L)
total nitrogen1400 (ug/L)
total phosphorus133 (ug/L)
turbidityNTU
metagenomic1
environmental-sample1
geo_loc_meLake Victoria
Completeness(%)80.23
Contamition (%)11.6
Strain Heterogeneity (%)73.33
Size (Mbp)2.159174
No. Of Contigs836
GC_Content (%)62.5
N503131
filesamp_4446_VAMB_280
Description

Super green/Bondo

Keywords: GSC:MIxS;MIMAG:6.0

Submission
University of Michigan, Lauren Hart; 2024-06-06
Accession:
SAMN41712105
ID:
41712105

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