LV_38_samp_4447_29. Yala River Mouth_2023

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Result Filters

Identifiers: BioSample: SAMN41712111; Sample name: ELB16-189 sp._LV_38_29. Yala River Mouth_2023

Organism: Flammeovirgaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae

Attributes

isolate	samp_4447_concoct_1029
isolation source	lake water
collection date	2023-06-02
depth	1m
derived from	SAMN41659707
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.0623 S 34.03812 E
collection method	Van dorn collection
conductivity	97.9(uS/cm)
dissolved oxygen	7.62mg/L
nitrate	7.89 (ug/L)
pH	7.8
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	4.1525(ug/L)
temperature	27.9degree C
total depth of water column	4.5m
total dissolved nitrogen	324(ug/L)
total nitrogen	1160 (ug/L)
total phosphorus	75.2 (ug/L)
turbidity	18.8NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	91.02
Contamition (%)	4.72
Strain Heterogeneity (%)	21.05
Size (Mbp)	3.337074
No. Of Contigs	900
GC_Content (%)	41.9
N50	4904
file	samp_4447_concoct_1029