LV_38_samp_4447_29. Yala River Mouth_2023

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Identifiers: BioSample: SAMN41712118; Sample name: UBA1268 bacterium_LV_38_29. Yala River Mouth_2023

Organism: Planctomycetia bacterium
cellular organisms; Bacteria; Pseudomonadati; PVC group; Planctomycetota; Planctomycetia; unclassified Planctomycetia

Attributes

isolate	samp_4447_metabat2_46
isolation source	lake water
collection date	2023-06-02
depth	1m
derived from	SAMN41659707
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.0623 S 34.03812 E
collection method	Van dorn collection
conductivity	97.9(uS/cm)
dissolved oxygen	7.62mg/L
nitrate	7.89 (ug/L)
pH	7.8
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	4.1525(ug/L)
temperature	27.9degree C
total depth of water column	4.5m
total dissolved nitrogen	324(ug/L)
total nitrogen	1160 (ug/L)
total phosphorus	75.2 (ug/L)
turbidity	18.8NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	78.67
Contamition (%)	4.19
Strain Heterogeneity (%)	66.67
Size (Mbp)	3.837513
No. Of Contigs	844
GC_Content (%)	68.5
N50	5041
file	samp_4447_metabat2_46