LV_39_samp_4448_30. Rosinga Channel_2023

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Result Filters

Identifiers: BioSample: SAMN41712162; Sample name: Nodosilinea sp._LV_39_30. Rosinga Channel_2023

Organism: Nodosilinea sp.
cellular organisms; Bacteria; Bacillati; Cyanobacteriota/Melainabacteria group; Cyanobacteriota; Cyanophyceae; Nodosilineales; Nodosilineaceae; Nodosilinea; unclassified Nodosilinea

Attributes

isolate	samp_4448_semibin_194
isolation source	lake water
collection date	2023-06-03
depth	1m
derived from	SAMN41659708
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.341 S 34.2403 E
collection method	Van dorn collection
conductivity	88.1(uS/cm)
dissolved oxygen	11.6mg/L
nitrate	ND
pH	7.5
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	13.2(ug/L)
temperature	26.2degree C
total depth of water column	20.4m
total dissolved nitrogen	224(ug/L)
total nitrogen	319 (ug/L)
total phosphorus	48.1 (ug/L)
turbidity	6.8NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	87.05
Contamition (%)	3.73
Strain Heterogeneity (%)	61.11
Size (Mbp)	3.362696
No. Of Contigs	400
GC_Content (%)	57.3
N50	10500
file	samp_4448_semibin_194