LV_40_samp_4449_31. South Rosinga_2023

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Result Filters

Identifiers: BioSample: SAMN41712209; Sample name: Hyphomicrobium sp._LV_40_31. South Rosinga_2023

Organism: Hyphomicrobium sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Hyphomicrobiaceae; Hyphomicrobium; unclassified Hyphomicrobium

Attributes

isolate	samp_4449_metadecoder_409
isolation source	lake water
collection date	2023-06-03
depth	1m
derived from	SAMN41659709
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.3742 S 34.23967 E
collection method	Van dorn collection
conductivity	143.1(uS/cm)
dissolved oxygen	6.7mg/L
nitrate	24.5 (ug/L)
pH	8.7
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	20.3(ug/L)
temperature	28.8degree C
total depth of water column	6.8m
total dissolved nitrogen	280(ug/L)
total nitrogen	832 (ug/L)
total phosphorus	120 (ug/L)
turbidity	23.7NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	87.38
Contamition (%)	1.72
Strain Heterogeneity (%)	37.5
Size (Mbp)	2.13459
No. Of Contigs	265
GC_Content (%)	41.7
N50	10057
file	samp_4449_metadecoder_409