SRS_1_samp_4452_14. Sondu River Shore_2023

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Result Filters

Identifiers: BioSample: SAMN41712274; Sample name: Novosphingobium sp._SRS_1_14. Sondu River Shore_2023_1

Organism: Novosphingobium sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium; unclassified Novosphingobium

Attributes

isolate	samp_4452_metabat2_51
isolation source	river
collection date	2023-05-29
depth	0.25m
derived from	SAMN41659712
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	river [ENVO: 00000022]
local-scale environmental context	stream [00000023]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.3478 S 34.79111 E
collection method	Shore sampling
nitrate	1019.5 (ug/L)
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	10.76(ug/L)
total dissolved nitrogen	1840(ug/L)
total nitrogen	1405 (ug/L)
total phosphorus	39.55 (ug/L)
metagenomic	1
environmental-sample	1
geo_loc_me	Kenya
Completeness(%)	80.99
Contamition (%)	15.78
Strain Heterogeneity (%)	38.96
Size (Mbp)	3.959665
No. Of Contigs	819
GC_Content (%)	63.1
N50	5551
file	samp_4452_metabat2_51