U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MAG: Pirellula sp. 2021-09-20 WE12

Identifiers
BioSample: SAMN45874971; Sample name: Pirellula sp. samp_4356_concoct_343
Organism
Pirellula sp.
cellular organisms; Bacteria; Pseudomonadati; PVC group; Planctomycetota; Planctomycetia; Pirellulales; Pirellulaceae; Pirellula; unclassified Pirellula
Package
MIMAG: metagenome-assembled genome, water; version 6.0
Attributes
size-fraction upper threshold3 μm
temperature22.7 °C
conductivity266.6 μS/cm
turbidity10.7 NTU
chlorophyll1.05 μg/L
soluble reactive phosphorus2.5 μg/L
particulate organic nitrogen0.3 mg/L
particulate organic carbon2 mg/L
suspended particulate matter13.08 mg/L
wind speed9.72 knots
collection date2021-09-20T14:00:00Z
depth0.75 m
broad-scale environmental contextlarge freshwater lake biome [ENVO:00000891]
local-scale environmental contextLake [ENVO:00000020]
environmental mediumwater [ENVO:00002006]
geographic locationUSA: Lake Erie
latitude and longitude41.701 N 83.2522 W
isolatesamp_4356_concoct_343
isolation sourcelake water
derived fromSAMN45060257
sample typemetagenomic assembly
metagenome sourcefreshwater metagenome
dissolved oxygen7.42 mg/L
GAZ_idGAZ:00003931
NOAA_SiteWE12
keywordsHABs
depth_at_sampling_location6.81 m
secchi0.5 m
part_microcyst0.52 μg/L
diss_microcyst0.23 μg/L
ext_phyco5.92 μg/L
tot_phos47.43 μg/L
diss_phosp7.62 μg/L
ammonia5.09 μg/L
suspend_vol_solid3.76 mg/L
attenuation7 m-1
transmission17.3 %
par124.4 μE/m2/s
skycloudy
wave_height1.31 ft
Notes8761-SRC-27
nitrate_nitrite0.014 mg/L
col_dom0.91 µg/L
SampleIDsamp_4356
Completeness (%)98.52
Contamination (%)2.46
Strain heterogeneity (%)33.33
metagenomic1
environmental-sample1
Description

Keywords: GSC:MIxS;MIMAG:6.0

BioProject
PRJNA1190886
Retrieve all samples from this project

Submission
University of Michigan, Paul Den Uyl; 2024-12-17
Accession:
SAMN45874971
ID:
45874971

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center