U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MAG: Pseudanabaena sp. 2022-08-17 WE4

Identifiers
BioSample: SAMN45875009; Sample name: Pseudanabaena sp. samp_4367_metabat2_24
Organism
Pseudanabaena sp.
cellular organisms; Bacteria; Bacillati; Cyanobacteriota/Melainabacteria group; Cyanobacteriota; Cyanophyceae; Pseudanabaenales; Pseudanabaenaceae; Pseudanabaena; unclassified Pseudanabaena
Package
MIMAG: metagenome-assembled genome, water; version 6.0
Attributes
size-fraction upper threshold3 μm
temperature23.7 °C
conductivity239.8 μS/cm
turbidity6.42 NTU
chlorophyll37.25 μg/L
soluble reactive phosphorus2.65 μg/L
particulate organic nitrogen0.34 mg/L
particulate organic carbon2.16 mg/L
suspended particulate matter9.1 mg/L
wind speed11.08 knots
collection date2022-08-17T13:00:00Z
depth0.75 m
broad-scale environmental contextlarge freshwater lake biome [ENVO:00000891]
local-scale environmental contextLake [ENVO:00000020]
environmental mediumwater [ENVO:00002006]
geographic locationUSA: Lake Erie
latitude and longitude41.8267 N 83.1939 W
isolatesamp_4367_metabat2_24
isolation sourcelake water
derived fromSAMN45060268
sample typemetagenomic assembly
metagenome sourcefreshwater metagenome
dissolved oxygen7.91 mg/L
GAZ_idGAZ:00003931
NOAA_SiteWE4
keywordsHABs
depth_at_sampling_location8.6 m
secchi1.5 m
part_microcyst1.79 μg/L
diss_microcyst0.22 μg/L
ext_phyco26.43 μg/L
tot_phos29.62 μg/L
diss_phosp9.45 μg/L
ammonia5.83 μg/L
suspend_vol_solid2.7 mg/L
par1453.5 μE/m2/s
skyclear
Notes8761-SRC-38
nitrate_nitrite0.052 mg/L
col_dom0.56 µg/L
SampleIDsamp_4367
Completeness (%)97.88
Contamination (%)0.94
Strain heterogeneity (%)42.86
metagenomic1
environmental-sample1
Description

Keywords: GSC:MIxS;MIMAG:6.0

BioProject
PRJNA1190886
Retrieve all samples from this project

Submission
University of Michigan, Paul Den Uyl; 2024-12-17
Accession:
SAMN45875009
ID:
45875009

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center