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MAG: Alphaproteobacteria 2022-09-12 WE4

Identifiers
BioSample: SAMN45875029; Sample name: Alphaproteobacteria samp_4375_semibin_14
Organism
Alphaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; unclassified Alphaproteobacteria
Package
MIMAG: metagenome-assembled genome, water; version 6.0
Attributes
size-fraction upper threshold3 μm
temperature23.1 °C
conductivity244.2 μS/cm
turbidity7.27 NTU
chlorophyll24.51 μg/L
soluble reactive phosphorus3.06 μg/L
particulate organic nitrogen0.24 mg/L
particulate organic carbon1.19 mg/L
suspended particulate matter7.63 mg/L
wind speed13.61 knots
collection date2022-09-12T13:02:00Z
depth0.75 m
broad-scale environmental contextlarge freshwater lake biome [ENVO:00000891]
local-scale environmental contextLake [ENVO:00000020]
environmental mediumwater [ENVO:00002006]
geographic locationUSA: Lake Erie
latitude and longitude41.8257 N 83.1986 W
isolatesamp_4375_semibin_14
isolation sourcelake water
derived fromSAMN45060276
sample typemetagenomic assembly
metagenome sourcefreshwater metagenome
dissolved oxygen7.44 mg/L
GAZ_idGAZ:00003931
NOAA_SiteWE4
keywordsHABs
depth_at_sampling_location7.9 m
secchi1.5 m
part_microcyst0.69 μg/L
diss_microcyst0.24 μg/L
ext_phyco14.56 μg/L
tot_phos41.38 μg/L
diss_phosp9.03 μg/L
ammonia7.65 μg/L
suspend_vol_solid3.1 mg/L
par51.2 μE/m2/s
skyovercast
Notes8761-SRC-46
nitrate_nitrite0.073 mg/L
col_dom0.39 µg/L
SampleIDsamp_4375
Completeness (%)91.61
Contamination (%)1.01
Strain heterogeneity (%)100
metagenomic1
environmental-sample1
Description

Keywords: GSC:MIxS;MIMAG:6.0

BioProject
PRJNA1190886
Retrieve all samples from this project

Submission
University of Michigan, Paul Den Uyl; 2024-12-17
Accession:
SAMN45875029
ID:
45875029

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