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Mycobacterium orygis NIAB_BDWBCSHFL_1 cattle isolate

Identifiers
BioSample: SAMN38195838; Sample name: Mycobacterium orygis NIAB_BDWBCSHFL_1; SRA: SRS19494959
Organism
Mycobacterium orygis
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
Package
Pathogen: clinical or host-associated; version 1.0
Attributes
strainNIAB_BDWBCSHFL_1
collected byBappaditya Dey
collection date2022-05-19
geographic locationIndia: Kolkata , West Bengal
hostBos taurus
host diseaseTubeculosis
isolation sourceLungs tissue
latitude and longitude22.5726 N 88.3639 E
Description

M. orygis is an emerging animal lineage member of Mycobacterium tuberculosis complex pathogens causing tuberculosis (TB) in a wide range of animals and humans. Detailed information about the drug resistance-related mutations and the status of virulence-related genes and genomic islands in M. orygis are yet to be deciphered. Considering its enormous zoonotic potential, and to gain comprehensive genomic and epidemiological knowledge, the genome of an M. orygis isolate from cattle in India was fully sequenced with high sequencing depth leading to the generation of a complete circular genome.

BioProject
PRJNA1037712 Mycobacterium orygis strain:NIAB_BDWBCSHFL_1
Retrieve all samples from this project

Submission
National Institute of Animal Biotechnology, Bappaditya Dey; 2023-11-10
Accession:
SAMN38195838
ID:
38195838

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