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Uncultivated Methylophaga bacterium UBA10688 genome recovered from ERX556345

Identifiers
BioSample: SAMN08017487; Sample name: UBA10688; SRA: SRS2843034
Organism
Methylophaga sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga; unclassified Methylophaga
Package
Microbe; version 1.0
Attributes
isolateUBA10688
isolation sourcemarine
collection datenot applicable
geographic locationnot applicable
sample typemetagenomic assembly
metagenome sourcemarine metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
genome_coverage51.46x
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
completeness_estimated75.02%
contamination_estimated3.44%
environmental_sampletrue
metagenomictrue
notemarine metagenome
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599341.
Description

Uncultivated genome recovered from an assembly of the ERX556345 metagenome.

BioProject
PRJNA417962 metagenome-assembled genomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-11-13
Accession:
SAMN08017487
ID:
8017487

BioProject SRA Nucleotide

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