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Uncultivated Janibacter terrae genome recovered from SRX546000

Identifiers
BioSample: SAMN08019036; Sample name: UBA9899; SRA: SRS2843389
Organism
Janibacter terrae
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales; Intrasporangiaceae; Janibacter
Package
Microbe; version 1.0
Attributes
isolateUBA9899
isolation sourcehydrocarbon
collection datenot applicable
geographic locationnot applicable
sample typemetagenomic assembly
metagenome sourcehydrocarbon metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
genome_coverage84.93x
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
completeness_estimated62.68%
contamination_estimated1.62%
environmental_sampletrue
metagenomictrue
notehydrocarbon metagenome
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR1313239,SRR1313240.
Description

Uncultivated genome recovered from an assembly of the SRX546000 metagenome.

BioProject
PRJNA417962 metagenome-assembled genomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-11-13
Accession:
SAMN08019036
ID:
8019036

BioProject SRA Nucleotide

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