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Uncultivated Pseudomonas sp. UBA11243 genome recovered from SRX111044

Identifiers
BioSample: SAMN08020494; Sample name: UBA11243; SRA: SRS2847349
Organism
Pseudomonas sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; unclassified Pseudomonas
Package
Microbe; version 1.0
Attributes
isolateUBA11243
isolation sourcemetagenome
collection datenot applicable
geographic locationnot applicable
sample typemetagenomic assembly
metagenome sourceBursaphelenchus xylophilus metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
genome_coverage5.53x
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
completeness_estimated71.04%
contamination_estimated2.66%
environmental_sampletrue
metagenomictrue
noteBursaphelenchus xylophilus metagenome
valueThis BioSample is a metagenomic assembly obtained from the Bursaphelenchus xylophilus metagenome reads: SRR389065.
Description

Uncultivated genome recovered from an assembly of the SRX111044 metagenome.

BioProject
PRJNA417962 metagenome-assembled genomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-11-13
Accession:
SAMN08020494
ID:
8020494

BioProject SRA Nucleotide

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