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Model organism or animal sample from Phocoena sinus

Identifiers
BioSample: SAMN12325353; Sample name: mPhoSin1 Vaquita tissue for G10K-VGP reference genome; SRA: SRS6121272
Organism
Phocoena sinus (vaquita)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
Package
Model organism or animal; version 1.0
Attributes
isolatemPhoSin1
labelSWFSC_186935
ageAdult
sexfemale
tissueCultured fibroblasts (kidney)
biomaterial providerInstitute for Conservation Research, San Diego Zoo
birth dateunknown
collected byFrances Gulland
collection date2017-11-04
geographic locationMexico: San Felipe, Baja California
latitude and longitude31.103595 N 114.679383 W
storage conditionsfrozen
sample nameV02F
permitNMFS MMPA_19091
fundingNOAA/NMFS
Description

The vaquita is the smallest porpoise, endemic to the upper Gulf of California, Mexico. The species is critically endangered, with fewer than 30 individuals estimated to remain in 2017. The sample was collected during an attempted capture to begin a captive breeding program, resulting in death of the adult female V02F. Tissue samples were collected during necropsy, and cells were cultured at the Institute for Conservation Research, San Diego Zoo. A portion of the cells have been used to generate a chromosomal-level reference assembly as part of the G10K-VGP Project.

BioProjects
PRJNA1008625
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PRJNA751981 Phocoena sinus
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PRJNA606521 Phocoena sinus isolate:mPhoSin1
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PRJNA557832 Phocoena sinus isolate:mPhoSin1
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PRJNA557831 Phocoena sinus isolate:mPhoSin1
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PRJNA516733 Various_Species
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Submission
G10K, Erich Jarvis; 2019-07-20
Accession:
SAMN12325353
ID:
12325353

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