Microbe sample from Pseudomonadota bacterium - BioSample - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Links from Nucleotide

Microbe sample from Pseudomonadota bacterium

Identifiers: BioSample: SAMN09638275; Sample name: Uncultivated Proteobacteria bacterium HyVt-111 genome recovered from SRR5214304; SRA: SRS3740124

Organism: Pseudomonadota bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; unclassified Pseudomonadota

Package: Microbe; version 1.0

Attributes

isolate	HyVt-111
isolation source	marine hydrothermal sediment
collection date	2009-12-02
geographic location	Mexico: Guaymas Basin, Gulf of California
sample type	metagenomic assembly
latitude and longitude	27.0078 N 111.4071 W
subsource note	Metagenome-assembled genome binned from sequencing reads available in SRR5214304
metagenome source	marine metagenome
assembly_method_and_version	DOE-JGI IMG deposited assembly (IMG Genome ID: 3300010332)
completeness_estimated	73.28
contamination_estimated	0.35
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	5.81
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA480137 metagenomes
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-07-11

Accession:: SAMN09638275
ID:: 9638275

BioProject SRA Nucleotide

Supplemental Content

Related information

BioProject
BioProject links
SRA
Links to SRA experiments
Nucleotide
Nucleotide links
Assembly
Assembly
Taxonomy
Links to Taxonomy

Recent activity

Clear Turn Off Turn On

BioSample links for Nucleotide (Select 1815664236) (1)
BioSample
Microbe sample from Pseudomonadota bacterium
Microbe sample from Pseudomonadota bacterium

biosample

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > DNA & RNA > BioSample