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Microbe sample from Dickeya zeae

Identifiers
BioSample: SAMN09742555; Sample name: EC2; SRA: SRS3616235
Organism
Dickeya zeae
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Dickeya
Package
Microbe; version 1.0
Attributes
strainEC2
hostOryza sativa
collection date2016-10
geographic locationChina: Guangdong
sample typetissue sample
collected byJingxin Zhang
identified byJingxin Zhang
Description

Dickeya zeae strain EC2 is a newly found pathogen infecting rice in Guangdong, China. Strain EC2 has many different characters from previously well-identified strain EC1 in Guangdong, China, including culture characters, biochemical characters and genome components. In the phylogenetic analysis, this newly emerging strain was distinct to those previously reported rice strains, which consisted of a close group. The purpose of this study is to sequence the whole genome of this novel strain and explore the genomic traits differing from the previously reported rice strains, thus help to understand their bacterial differentiation and evolvement.

BioProject
PRJNA483372 Dickeya zeae
Retrieve all samples from this project

Submission
Guangdong Academy of Agricultural Science, P. R. China, Jingxin Zhang; 2018-07-30
Accession:
SAMN09742555
ID:
9742555

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