MIGS Cultured Bacterial/Archaeal sample from Clost... - BioSample

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MIGS Cultured Bacterial/Archaeal sample from Clostridium sporogenes ATCC 15579

Identifiers: BioSample: SAMN00000018; Sample name: 20549; SRA: SRS000018

Organism: Clostridium sporogenes ATCC 15579
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium; Clostridium sporogenes

Package: MIGS: cultured bacteria/archaea; version 6.0

Attributes

collection date	not determined
estimated size	4102000
host	Homo sapiens
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
local-scale environmental context	human-associated habitat [ENVO:00009003]
investigation type	missing
host taxonomy ID	9606 (9606)
project name	Clostridium sporogenes ATCC 15579
geographic location	not determined
source material identifiers	ATCC 15579
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
number of replicons	not determined
isolation and growth condition	not determined
environmental package	missing
strain	ATCC 15579
isolation source	missing
finishing strategy (depth of coverage)	Level 3: Improved-High-Quality Draft8.9x;5
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
project_type	Reference Genome
misc_param: HMP body site	not determined
nucleic acid extraction	not determined
assembly	PCAP
misc_param: HMP supersite	gastrointestinal_tract
sequencing method	454-GS20, Sanger

Description

Clostridium sporogenes (GenBank Accession Number for 16S rDNA gene: DQ911258*) is a member of the Firmicutes division of the domain bacteria and has been isolated from human feces.

Keywords: GSC:MIxS;MIGS:6.0

Links: DNA Source

BioProjects: PRJNA266358 Vigna
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PRJNA20549 Clostridium sporogenes ATCC 15579
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