Bin D2T0

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Result Filters

Organism: Haloquadratum walsbyi
cellular organisms; Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Halobacteria; Halobacteriales; Haloferacaceae; Haloquadratum

Attributes

collection date	2012
broad-scale environmental context	Hypersaline environments
local-scale environmental context	Cristallyzer pond
environmental medium	Brines
geographic location	Spain
investigation type	metagenome-assembled genome
isolation source	Hipersaline environment
project name	PRJEB27680
sample name	D2T01
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2020-07-20T17:08:42Z
ENA-LAST-UPDATE	2020-07-20T15:35:09Z
External Id	SAMEA7074294
INSDC center name	IMEDEA
INSDC first public	2020-07-20T17:08:42Z
INSDC last update	2020-07-20T15:35:09Z
INSDC status	public
Submitter Id	D2T01
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	IDBA
binning parameters	Minim contig lengty 1000
binning software	MaxBin
completeness score	100
completeness software	MIGA
contamination score	0
geographic location (latitude)	39º 20' 46''
geographic location (longitude)	2º 59' 22'
metagenomic source	hypersaline lake metagenome
sample derived from	ERS2600790
scientific_name	Haloquadratum walsbyi
sequencing method	Illumina HiSeq
taxonomic identity marker	ANI value