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syntrophales_1

Identifiers
BioSample: SAMN16148051; Sample name: das_tool.concoct.87_sub
Organism
Pseudomonadota bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; unclassified Pseudomonadota
Package
MIMAG: metagenome-assembled genome, sediment; version 6.0
Attributes
isolation sourceBothnian Sea site NB8 sediments 37-42 cm depth; used to inoculate methane- and iron-fed bioreactor (T0); bioreactor biomass 16 months after reactor inoculation (T1); and 29 months after reactor inoculation (T2)
collection date2018-11-22
geographic locationSweden: Bothnian Sea
latitude and longitude63.484517 N 19.830400 E
isolateMAG53
depth37-42 cm
elevationnon applicable
broad-scale environmental contextsediments and biomass from bioreactor inoculated with such sediments
local-scale environmental contextcoastal sediments
environmental mediummethane- and iron-fed bioreactor
sample typemetagenomic assembly
metagenome sourcemarine sediment metagenome
derived fromThis BioSample is a metagenomic assembly obtained from the marine sediment metagenome BioSamples: SAMN16134109, SAMN16134110, SAMN16134111, and SAMN16134112.
organism modifier notesyntrophales_1
completeness(%)54.5
redundancy(%)10.02
total_coverage3.6
metagenomic1
environmental-sample1
Description

Keywords: GSC:MIxS;MIMAG:6.0

BioProject
PRJNA663545 marine sediment metagenome
Retrieve all samples from this project

Submission
Radboud University Nijmegen, Paula Dalcin Martins; 2020-09-15
Accession:
SAMN16148051
ID:
16148051

BioProject Nucleotide

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