E. coli WGS assembly

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Result Filters

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Attributes

strain	1.EC
serotype	O1:H6
subgroup	F
genotype	ST648
pathotype	E. coli EXPEC
collection date	2011-06-30
geographic location	Colombia
host	Homo sapiens
host disease	Urinary tract Infection
isolation source	urine
latitude and longitude	4.1156735 N 72.9301367 W
host age	Unknown
host sex	N/A
host subject id	1EC
host tissue sampled	N/A
broad-scale environmental context	N/A
local-scale environmental context	N/A
environmental medium	N/A
isolation and growth condition	Isolated from Urine
number of replicons	1
reference for biomaterial	Primary publication
chemical administration	Unknown
encoded traits	Antibiotic resistant
estimated size	5170000
ethnicity	N/A
extrachromosomal elements	Unknown
gastrointestinal tract disorder	Unknown
health state	N/A
host body mass index	N/A
host body product	N/A
host body temperature	N/A
host diet	N/A
host family relationship	N/A
host genotype	N/A
host height	N/A
host last meal	N/A
host occupation	N/A
host phenotype	N/A
host pulse	N/A
host taxonomy ID	9606 (9606)
host total mass	N/A
medication code	N/A
liver disorder	Unknown
medical history performed	Unknown
miscellaneous parameter	Unknown
Omics Observatory ID	N/A
organism count	N/A
oxygenation status of sample	Unknown
pathogenicity	Urinary tract Infection
perturbation	N/A
relationship to oxygen	N/A