Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Macropus giganteus (eastern gray kangaroo)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Macropus

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	40114
sex	male
tissue	muscle
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/1b8c7c4a-ba81-4e27-8ca4-70e8dbcbbd6b
BPA_library_ID	52745
BPA_sample_ID	40114
CALLABLE	1576299
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:28Z
ENA-LAST-UPDATE	2020-09-25T00:34:19Z
External Id	SAMEA7321020
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:28Z
INSDC last update	2020-09-25T00:34:19Z
INSDC status	public
LOW_COVERAGE	112639
NO_COVERAGE	554
ReadLength	100bp
Submitter Id	40114
TCCP_ID	40114_LANES3
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammalogy
common name	eastern gray kangaroo
depthmean	165.41
depthmedian	116
family	Macropodidae
genus	Macropus
geographic location (region and locality)	New South Wales
institution_name	Australian Museum
location_text	Cowan Field Station
order	Diprotodontia
phylum	Chordata
scientific_name	Macropus giganteus
sequencing method	Illumina SBS, short PE reads
species	giganteus
state_or_region	New South Wales
tissue_number	EBU46842
tissue_preservation	frozen
totalmapped2tgt	0.5061
totalpaired	0.4406
totalreadsstart	6330976
voucher_number	AM M.41395.001
voucher_or_tissue_number	AM M.41395.001