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Rhizophagus irregularis DAOM-197198 chromosome-scale genome assembly

Identifiers
BioSample: SAMN31081226; Sample name: Chr_Rhiir_DAOM197198; SRA: SRS15469460
Organism
Rhizophagus irregularis
cellular organisms; Eukaryota; Opisthokonta; Fungi; Fungi incertae sedis; Mucoromycota; Glomeromycotina; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus
Package
Microbe; version 1.0
Attributes
isolateDAOM-197198
hostnot applicable
isolation sourcenot applicable
collection datenot applicable
geographic locationnot applicable
sample typeSpores
Description

This work presents the most contiguous and highest-quality nuclear and mitochondrial genome assemblies of an arbuscular mycorrhizal fungus to date, achieved through Nanopore long-read DNA sequencing and Hi-C data. This genome assembly, alongside short- and long-read RNA-Sequencing data, was used to produce a comprehensive annotation catalogue of gene models, repetitive elements, small RNA loci, and DNA cytosine methylome.

BioProjects
PRJNA1128271 Rhizophagus irregularis strain:DAOM197198
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PRJNA885267 Rhizophagus irregularis strain:DAOM197198
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Submission
Royal Botanic Gardens Kew, Alexandra Dallaire; 2022-09-29
Accession:
SAMN31081226
ID:
31081226

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