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Microbe sample from Aliivibrio sp. S3MY1

Identifiers
BioSample: SAMN33277181; Sample name: UTAS_Aliivib2
Organism
Aliivibrio sp. S3MY1
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Aliivibrio; unclassified Aliivibrio
Package
Microbe; version 1.0
Attributes
strainS3MY1
hostSalmo salar
collection date2018
geographic locationAustralia: south east Tasmania
sample typecell culture
biomaterial providerJohn P. Bowman
collected byJohn P. Bowman
depth5 m
broad-scale environmental contextENVO:00000294
host tissue sampledgastrointestinal mucosa
identified byJohn P. Bowman
latitude and longitude43.21 S 147.30 E
temperature15-18 C
isolation sourcegastrointestinal mucosa
Description

Atlantic salmon and other salmonid species can harbour Vibrionaceae as a major component of the gut microbiome when reared in sea cages. Observations suggest some members of this family cause a dysbiosis when farmed salmonids are thermally stressed. An improved understanding is required of the biology of salmon associated Vibrionaceae and how they may contribute beneficially and negatively to the welfare and growth of farmed fish. In this study the genetics and distribution of Vibrionaceae in the gut of farmed salmonids was investigated to determine key biological traits.

BioProject
PRJNA934681 Aliivibrio
Retrieve all samples from this project

Submission
University Of Tasmania, Tasmania Inst Agriculture, John Bowman; 2023-02-13
Accession:
SAMN33277181
ID:
33277181

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