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Pathogen: environmental/food/other sample from Escherichia coli

Identifiers
BioSample: SAMN33436670; Sample name: ECOL-21-VL-NY-GA-0024; SRA: SRS16886003
Organism
Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Package
Pathogen: environmental/food/other; version 1.0
Attributes
strainECOL-21-VL-NY-GA-0024
collected byUniversity of Georgia College of Veterinary Medicine Tifton Veterinary Diagnostic and Investigational Laboratory
collection date2021-10-29
geographic locationUSA:GA
isolation sourceurine
latitude and longitudemissing
sequenced byWGS-NY
source typeanimal
hostCanis lupus familiaris
host diseaseNo history given
project nameVet-LIRN
BioProject
PRJNA324565 Escherichia coli
Retrieve all samples from this project

Submission
Vet-LIRN-NY; 2023-02-24
Antibiogram
AntibioticResistance phenotypeMeasurement signMeasurementMeasurement unitsLaboratory typing methodLaboratory typing platformVendorLaboratory typing method version or reagentTesting standard
cefpodoximenot defined<=1mg/LMICSensititreTrek96-Well PlateCLSI
gentamicinnot defined==1mg/LMICSensititreTrek96-Well PlateCLSI
imipenemnot defined<=1mg/LMICSensititreTrek96-Well PlateCLSI
cefazolinnot defined==2mg/LMICSensititreTrek96-Well PlateCLSI
cefovecinnot defined==2mg/LMICSensititreTrek96-Well PlateCLSI
pradofloxacinnot defined>2mg/LMICSensititreTrek96-Well PlateCLSI
amikacinnot defined<=4mg/LMICSensititreTrek96-Well PlateCLSI
ceftazidimenot defined<=4mg/LMICSensititreTrek96-Well PlateCLSI
enrofloxacinnot defined>4mg/LMICSensititreTrek96-Well PlateCLSI
marbofloxacinnot defined>4mg/LMICSensititreTrek96-Well PlateCLSI
trimethoprim-sulfamethoxazolenot defined>4/76mg/LMICSensititreTrek96-Well PlateCLSI
amoxicillin-clavulanic acidnot defined==8/4mg/LMICSensititreTrek96-Well PlateCLSI
ampicillinnot defined>8mg/LMICSensititreTrek96-Well PlateCLSI
cephalexinnot defined==8mg/LMICSensititreTrek96-Well PlateCLSI
doxycyclinenot defined==8mg/LMICSensititreTrek96-Well PlateCLSI
orbifloxacinnot defined>8mg/LMICSensititreTrek96-Well PlateCLSI
piperacillin-tazobactamnot defined<=8/4mg/LMICSensititreTrek96-Well PlateCLSI
tetracyclinenot defined>16mg/LMICSensititreTrek96-Well PlateCLSI
chloramphenicolnot defined>32mg/LMICSensititreTrek96-Well PlateCLSI
Accession:
SAMN33436670
ID:
33436670

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