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Metagenome-Assembled Genome (MAG)

Identifiers
BioSample: SAMEA13566311; SRA: ERS11168239
Organism
Parabacteroides johnsonii
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides
Attributes
collection datenot provided
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
environmental mediumfaeces
geographic locationnot provided
investigation typemetagenome-assembled genome
isolation sourcehuman gut
project nameDonor samples from Lyophilised oral faecal microbiota transplantation for ulcerative colitis (LOTUS) study shotgun
sample nameMTG225_bin.24.fa
ENA-CHECKLISTERC000050
ENA-FIRST-PUBLIC2022-07-28
ENA-LAST-UPDATE2022-07-28
External IdSAMEA13566311
INSDC center aliasUNIVERSITY OF NEW SOUTH WALES
INSDC center nameUNIVERSITY OF NEW SOUTH WALES
INSDC first public2022-07-28T00:45:23Z
INSDC last update2022-07-28T00:45:23Z
INSDC statuspublic
Submitter IdMTG225_bin.24.fa
assembly softwareMetaWRAP;1.3.2
binning parametersdefault
binning softwareMetaWRAP;1.3.2
geographic location (latitude)not provided
geographic location (longitude)not provided
metagenomic sourcehuman gut metagenome
sample derived fromERS10468697
sequencing methodIllumina
Description

This sample represents a MAG from the metagenomic run ERR8477584

BioProject
PRJEB50699 Oral lyophilised faecal microbiota transplantation in ulcerative colitis shotgun
Retrieve all samples from this project

Submission
EBI; 2022-07-29
Accession:
SAMEA13566311
ID:
30036046

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