Metagenome-assembled genome: SRR1763383_bin.67_CON... - BioSample

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Result Filters

Organism: Nitrosomonas europaea
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas

Attributes

collection date	2014-04-06
broad-scale environmental context	Engineered
local-scale environmental context	Wastewater
environmental medium	Wastewater
geographic location	Switzerland
investigation type	metagenome-assembled genome
isolation source	wastewater metagenome
project name	Metagenome sample from Final activated sewage sludge GCZ13
sample name	SRR1763383_bin.67_CONCOCT_v1.1_MAG
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2023-01-03T00:32:04Z
ENA-LAST-UPDATE	2023-01-03T00:32:04Z
External Id	SAMEA14036519
INSDC center name	EBI
INSDC first public	2023-01-03T00:32:04Z
INSDC last update	2023-01-03T00:32:04Z
INSDC status	public
Submitter Id	SRR1763383_bin.67_CONCOCT_v1.1_MAG
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaspadesv3.12.0
binning parameters	Default
binning software	CONCOCT v1.1
broker name	EMG broker account, EMBL-EBI
completeness score	97.13
completeness software	CheckM
contamination score	0.15
geographic location (latitude)	46.19839
geographic location (longitude)	6.1422963
metagenomic source	wastewater metagenome
sample derived from	SAMN03220277
scientific_name	Nitrosomonas europaea
sequencing method	Illumina HiSeq 2500
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR1763383 of study SRP051963.