MAG MJ-time_bin-0961 from assembly ERS4649303

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Result Filters

Organism: uncultured Nevskia sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Nevskiales; Nevskiaceae; Nevskia; environmental samples

Attributes

collection date	2011-01-02/2013-01-29
broad-scale environmental context	lentic water body
local-scale environmental context	lake
environmental medium	water
geographic location	Finland
investigation type	metagenome
isolation source	lake water
project name	microbes in stratified freshwaters
sample name	MJ-time_bin-0961
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2020-06-15T17:03:32Z
ENA-LAST-UPDATE	2020-06-18T09:06:57Z
External Id	SAMEA6953605
INSDC center name	BILS
INSDC first public	2020-06-15T17:03:32Z
INSDC last update	2020-06-18T09:06:57Z
INSDC status	public
Submitter Id	MJ-time_bin-0961
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	megahit
binning parameters	min_len:1500,min_bin_size:10000,maxP:93,minS:50
binning software	metabat
collection data	metagenome
completeness score	95.15
completeness software	checkm
contamination score	3.12
geographic location (depth)	2.5
geographic location (latitude)	61.23083333333334
geographic location (longitude)	25.142222222222223
gtdb_taxonomy	d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__Nevskia;s__Nevskia ramosa
metagenomic OTU	anoxic_mOTU_0289
metagenomic source	lake water metagenome
region	Evo
sample derived from	ERS4649303
sample owner	Jatta Saarenheimo
scientific_name	uncultured Nevskia sp.
sequencing method	NovaSeq
site name	Mekkojärvi
taxonomic identity marker	gtdbtk followed by sourmash-lca, see publication
water environmental package	water