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Pathogen: clinical or host-associated sample from Clostridioides difficile

Identifiers: BioSample: SAMN13029167; Sample name: AR-1086; SRA: SRS6484545

Organism: Clostridioides difficile
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Clostridioides

Package: Pathogen: clinical or host-associated; version 1.0

Attributes

isolate	missing
collected by	missing
collection date	2016
geographic location	USA
host disease	missing
latitude and longitude	missing
strain	CDI-20
isolation source	missing
host	Homo sapiens
panel_id	CDI-20
Tax ID	3068253

BioProjects: PRJNA629351 Clostridioides difficile
Retrieve all samples from this project

PRJNA577141
Retrieve all samples from this project

Submission: Centers for Disease Control and Prevention, Brian Yoo; 2019-10-15

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
ceftriaxone	not defined	==	32	mg/L	MIC			agar dilution	CLSI
clindamycin	not defined	==	4	mg/L	MIC			agar dilution	CLSI
meropenem	not defined	==	1	mg/L	MIC			agar dilution	CLSI
metronidazole	not defined	==	0.25	mg/L	MIC			agar dilution	CLSI
moxifloxacin	not defined	==	1	mg/L	MIC			agar dilution	CLSI
vancomycin	not defined	==	0.5	mg/L	MIC			agar dilution	CLSI

Accession:: SAMN13029167
ID:: 13029167

BioProject SRA Nucleotide

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Pathogen: clinical or host-associated sample from Clostridioides difficile
Pathogen: clinical or host-associated sample from Clostridioides difficile

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