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Pathogen: clinical or host-associated sample from Staphylococcus capitis subsp. urealyticus

Identifiers: BioSample: SAMN38029087; Sample name: Single-colony culture of S. capitis clinical isolate Sc1365706; SRA: SRS20153301

Organism: Staphylococcus capitis subsp. urealyticus
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus capitis

Package: Pathogen: clinical or host-associated; version 1.0

Attributes

collected by	missing
collection date	2019-04
geographic location	United Kingdom: England, South East
host	Homo sapiens
host disease	sepsis
isolation source	blood
latitude and longitude	missing
genotype	Non-NRCS-A
host age	>=18 years
host health state	diseased
isolate	missing
strain	Sc1365706
sub species	urealyticus

Description: Whole-genome sequencing data and antibiograms of isolate Sc1365706

BioProject: PRJNA1032276 Staphylococcus capitis
Retrieve all samples from this project

Submission: Imperial College London, Yu Wan; 2023-10-29

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
cefoxitin	not defined	==	8	mg/L	MIC				EUCAST
ciprofloxacin	intermediate	==	0.5	mg/L	MIC				EUCAST
clindamycin	susceptible	==	0.125	mg/L	MIC				EUCAST
daptomycin	susceptible	==	0.5	mg/L	MIC				EUCAST
erythromycin	resistant	>	256	mg/L	MIC				EUCAST
fusidic acid	resistant	==	32	mg/L	MIC				EUCAST
gentamicin	resistant	==	128	mg/L	MIC				EUCAST
linezolid	susceptible	==	1	mg/L	MIC				EUCAST
mupirocin	not defined	==	0.125	mg/L	MIC				EUCAST
quinupristin-dalfopristin	susceptible	==	0.5	mg/L	MIC				EUCAST
rifampin	susceptible	==	0.016	mg/L	MIC				EUCAST
teicoplanin	susceptible	==	1	mg/L	MIC				EUCAST
vancomycin	susceptible	==	1	mg/L	MIC				EUCAST

Accession:: SAMN38029087
ID:: 38029087

BioProject SRA Nucleotide

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Pathogen: clinical or host-associated sample from Staphylococcus capitis subsp. ...
Pathogen: clinical or host-associated sample from Staphylococcus capitis subsp. urealyticus

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