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MIMAG Metagenome-assembled Genome sample from Candidatus Rokuibacteriota bacterium

Identifiers
BioSample: SAMN39963556; Sample name: Lejia_D_Candidatus_Rokubacteria_71_22; SRA: SRS20516868
Organism
Candidatus Rokuibacteriota bacterium
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; Candidatus Rokuibacteriota; unclassified Candidatus Rokuibacteriota
Package
MIMAG: metagenome-assembled genome, sediment; version 6.0
Attributes
isolation sourceSediment layer of the Laguna Lejia terrace
collection date2018-11
geographic locationChile: Laguna Lejia, Altiplano, Andes
latitude and longitude23.5 S 67.7 W
pH8.28
derived fromSAMN39953878
isolateLejiaD_2_71_22
depth35-38 cm
elevation4,325 m.a.s.l.
broad-scale environmental contextlake sediment biome (ENVO:00000546)
local-scale environmental contextsaline sediment environment (ENVO:01001050)
environmental mediumsaline sediment environment (ENVO:01001050)
sample typemetagenomic assembly
metagenome sourcesediment metagenome
Chlorine (ppm)4941.73336736943
Sodium (ppm)9284.01015628301
Magnesium (ppm)3223.84829597279
Potassium (ppm)1036.09059721905
Calcium (ppm)284.959088402341
Sulfur from sulfate (ppm)4873.84387281131
Boron (ppm)188.920159540517
Fluorine (ppm)25.5461276997009
Lithium (ppm)16.1942163738881
Nitrogen from nitrate (ppm)6.34128686555747
Bismuth (ppm)12.7829114070755
Bromine (ppm)0
Strontium (ppm)1.5477606291259
Arsenic (ppm)5.30816859612593
Vanadium (ppm)4.09108802983144
Rubidium (ppm)1.5477606291259
Molybdenum (ppm)0.238911874380303
Magnesium calcite (%)12.2
Albite (%)0
Andesine (%)0
Anorthite (%)50.5
Anorthoclase (%)35.9
Muscovite (%)0
Gypsum (%)0
Halite (%)1.4
Quartz (%)0
metagenomic1
environmental-sample1
Description

In depth column, depths start from the base of the lake terrace (0 cm) and ascend vertically (up to 95 cm)

Keywords: GSC:MIxS;MIMAG:6.0

BioProject
PRJNA1076829
Retrieve all samples from this project

Submission
Centro de Astrobiologia, Maria Angeles Lezcano Vega; 2024-02-16
Accession:
SAMN39963556
ID:
39963556

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