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Animal sample from Urocitellus parryii (Arctic ground squirrel) for VGP reference genome, mUroPar1

Identifiers
BioSample: SAMN44461866; Sample name: Animal sample from Urocitellus parryii (Arctic ground squirrel) for VGP reference genome, mUroPar1
Organism
Urocitellus parryii (Arctic ground squirrel)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus
Package
Model organism or animal; version 1.0
Attributes
isolatemUroPar1
development stageadult
collection date2011-11-16
geographic locationUSA: Pump Station No. 4 Area, Alaska
sexmale
tissuemuscle
biomaterial providerUniversity of Alaska Fairbanks: Anya Goropashnaya
collected byUniversity of Alaska Fairbanks, Vadim Fedorov
latitude and longitude68.42815 N 149.353 W
storage conditions-80oC
treatmentflash frozen
Source IDAGS 11-24
Description

The Arctic ground squirrel (Urocitellus parryii) is a species of ground squirrel native to the Arctic and Subarctic of North America and Asia. It can be found in regions of Northern Canada ranging from the Arctic Circle to northern British Columbia, and down to the southern border of the Northwest Territories, as well as Alaska and Siberia (from Wikipedia entry). The sample was procured from the Pump Station No. 4 area of Northern Alaska by Vadim Fedorov and Anya Goropashnaya of the University of Alaska Fairbanks and coordinated by Trygve Bakken, Ed Lein, and Rebecca Hodge at the Allen Institute for Brain Science to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genome Lab (VGL) at the Rockefeller University, led by Erich D. Jarvis, Giulio Formenti, and Jennifer Balacco.

BioProjects
PRJNA1178114 Urocitellus parryii isolate:mUroPar1
Retrieve all samples from this project

PRJNA1178113 Urocitellus parryii isolate:mUroPar1
Retrieve all samples from this project

Submission
G10K, Erich Jarvis; 2024-10-26
Accession:
SAMN44461866
ID:
44461866

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