LV_7_samp_4313_5. Mbita East_2022

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Identifiers: BioSample: SAMN41711599; Sample name: UBA12189 sp003530835_LV_7_5. Mbita East_2022

Organism: Holophagaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; Acidobacteriota; Holophagae; Holophagales; Holophagaceae; unclassified Holophagaceae

Attributes

isolate	samp_4313_metadecoder_572
isolation source	lake water
collection date	2022-06-24
depth	1m
derived from	SAMN41659676
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.4155 S 34.20972 E
chlorophyll	24.61 (ug/L)
collection method	Van dorn collection
conductivity	108.7(uS/cm)
dissolved oxygen	8.05mg/L
nitrate	20.9 (ug/L)
pH	7.4
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	40.7(ug/L)
temperature	25.5degree C
total depth of water column	13m
turbidity	8.3NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	82.86
Contamition (%)	0.05
Strain Heterogeneity (%)	100
Size (Mbp)	1.064717
No. Of Contigs	37
GC_Content (%)	45.7
N50	48256
file	samp_4313_metadecoder_572