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MAG: Gemmatimonas sp. 2022-08-17 WE2

Identifiers
BioSample: SAMN45874989; Sample name: Gemmatimonas sp. samp_4366_concoct_831
Organism
Gemmatimonas sp.
cellular organisms; Bacteria; Pseudomonadati; FCB group; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas; unclassified Gemmatimonas
Package
MIMAG: metagenome-assembled genome, water; version 6.0
Attributes
size-fraction upper threshold3 μm
temperature24.1 °C
conductivity291.8 μS/cm
turbidity31.5 NTU
chlorophyll125.49 μg/L
soluble reactive phosphorus4.6 μg/L
particulate organic nitrogen1.41 mg/L
particulate organic carbon7.53 mg/L
suspended particulate matter30.1 mg/L
wind speed5.83 knots
collection date2022-08-17T17:14:00Z
depth0.75 m
broad-scale environmental contextlarge freshwater lake biome [ENVO:00000891]
local-scale environmental contextLake [ENVO:00000020]
environmental mediumwater [ENVO:00002006]
geographic locationUSA: Lake Erie
latitude and longitude41.7626 N 83.3289 W
isolatesamp_4366_concoct_831
isolation sourcelake water
derived fromSAMN45060267
sample typemetagenomic assembly
metagenome sourcefreshwater metagenome
dissolved oxygen7.94 mg/L
GAZ_idGAZ:00003931
NOAA_SiteWE2
keywordsHABs
depth_at_sampling_location5.8 m
secchi0.5 m
part_microcyst7.32 μg/L
diss_microcyst0.52 μg/L
ext_phyco114.6 μg/L
tot_phos106.94 μg/L
diss_phosp16.64 μg/L
ammonia6.71 μg/L
suspend_vol_solid14.2 mg/L
par541.7 μE/m2/s
skyclear
Notes8761-SRC-37
nitrate_nitrite0.376 mg/L
col_dom1.97 µg/L
SampleIDsamp_4366
Completeness (%)96.05
Contamination (%)3.48
Strain heterogeneity (%)25
metagenomic1
environmental-sample1
Description

Keywords: GSC:MIxS;MIMAG:6.0

BioProject
PRJNA1190886
Retrieve all samples from this project

Submission
University of Michigan, Paul Den Uyl; 2024-12-17
Accession:
SAMN45874989
ID:
45874989

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