Metagenome-assembled genome: SRP173033_co1_52

Organism: uncultured Conexibacter sp.
cellular organisms; Bacteria; Bacillati; Actinomycetota; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter; environmental samples

Attributes

broad-scale environmental context	engineered
collection date	2015-03-13
environmental medium	engineered
geographic location	Uruguay
investigation type	metagenome-assembled genome
isolation source	activated sludge metagenome
project name	Global Water Microbiome Consortium (GWMC) conducted a global-scale investigation of microbiome in activated sludge since 2014, to understand biodiversity, biogeography, and underlying mechanisms of microbial communities in wastewater treatment plants (WWTPs) around the world. The activated sludge samples were collected from more than 260 WWTPs in 23 countries on 6 continents in 2014 and 2015.
sample name	SRP173033_co1_52
ENA first public	2024-12-11
ENA-CHECKLIST	ERC000047
INSDC center name	CMR
INSDC status	public
Submitter Id	SRP173033_co1_52
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaSPAdes;3.15.4;default
binning parameters	coverage and kmer
binning software	MetaBAT2;2.15;default
completeness score	75.32
completeness software	CheckM2;1.0.2;default
contamination score	1.6
geographic location (latitude)	-34.5059
geographic location (longitude)	-56.298
local environmental context	activated sludge biome
metagenomic source	activated sludge metagenome
sample derived from	SAMN19518238,SAMN19518239
scientific_name	uncultured Conexibacter sp.
sequencing method	Illumina HiSeq 3000
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR14932608,SRR14932609 of study SRP173033.

BioProject: PRJEB82487 Bin Chicken Rare Biosphere Genomes
Retrieve all samples from this project

BioSample