Metagenome-assembled genome: binchicken_co54_154

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Result Filters

Organism: uncultured Aquabacterium sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiales genera incertae sedis; Aquabacterium; environmental samples

Attributes

broad-scale environmental context	terrestrial
collection date	not provided
environmental medium	terrestrial
geographic location	USA
investigation type	metagenome-assembled genome
isolation source	rhizosphere metagenome
project name	Rhizosphere microbial communities from Carex aquatilis grown in submerged peat from a thermokarst bog, University of Washington, Seatle, WA, United States
sample name	binchicken_co54_154
ENA first public	2024-12-11
ENA-CHECKLIST	ERC000047
INSDC center name	CMR
INSDC status	public
Submitter Id	binchicken_co54_154
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaSPAdes;3.15.4;default
binning parameters	coverage and kmer
binning software	MetaBAT2;2.15;default
completeness score	63.97
completeness software	CheckM2;1.0.2;default
contamination score	0.43
geographic location (latitude)	47.6516
geographic location (longitude)	-122.3045
local environmental context	rhizosphere biome
metagenomic source	rhizosphere metagenome
sample derived from	SAMN10350572,SAMN10864359
scientific_name	uncultured Aquabacterium sp.
sequencing method	Illumina NovaSeq 6000
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8464957,SRR8543846 of study SRP180570.