Metagenome-assembled genome: SRP155585_co1_38

Organism: uncultured Maribacter sp.
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter; environmental samples

Attributes

broad-scale environmental context	aquatic
collection date	2010-03-01
environmental medium	aquatic
geographic location	Antarctica
investigation type	metagenome-assembled genome
isolation source	marine sediment metagenome
project name	Study's goal was to sequence metagenomes from marine sediments with varying proximity to the wastewater effluent source at Davis station (Antarctica) in addition to nearby marine animal feces. This data set has relevance for determining the impact that research station wastewater has upon nearby environmental microbial communities and the GIT of native wildlife species.
sample name	SRP155585_co1_38
ENA first public	2024-12-11
ENA-CHECKLIST	ERC000047
INSDC center name	CMR
INSDC status	public
Submitter Id	SRP155585_co1_38
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaSPAdes;3.15.4;default
binning parameters	coverage and kmer
binning software	MetaBAT2;2.15;default
completeness score	65.81
completeness software	CheckM2;1.0.2;default
contamination score	1.41
geographic location (latitude)	not provided
geographic location (longitude)	not provided
local environmental context	marine sediment biome
metagenomic source	marine sediment metagenome
sample derived from	SAMN09708230,SAMN09708228
scientific_name	uncultured Maribacter sp.
sequencing method	Illumina HiSeq 2000
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR7614706,SRR7614708 of study SRP155585.

BioProject: PRJEB82487 Bin Chicken Rare Biosphere Genomes
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BioSample