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Pathogen: clinical or host-associated sample from Staphylococcus aureus

Identifiers: BioSample: SAMN38754069; Sample name: Staphylococcus aureus str BSN41

Organism: Staphylococcus aureus
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus

Package: Pathogen: clinical or host-associated; version 1.0

Attributes

strain	BSN41
isolate name alias	B0583
collected by	Andrew D. Berti
collection date	2020-09-20
geographic location	USA: Detroit, MI
host	Homo sapiens
host disease	pneumonia
isolation source	blood
latitude and longitude	42.33 N 83.05 W
genotype	ST8-MRSA-IVa CC8
host age	45
host description	Patient presented with shortness of breath and hemoptysis secondary to multifocal staphylococcal pneumonia. Patient clinical course was complicated by concomitant staphylococcal bacteremia, acute hypoxic respiratory failure requiring intubation and empyema. Computed tomography revealed multiple loculations consistent with pleural abscesses and left lobular nodules consistent with septic pulmonary emboli. Patient demonstrated significant functional improvement following abscess drainage and video-assisted thoracoscopic surgery was not pursued. Patient was managed medically with vancomycin monotherapy advanced to daptomycin plus ceftaroline and consolidated back to vancomycin monotherapy prior to discharge in stable condition to a skilled nursing facility. Duration of bacteremia: 5 days.
host disease outcome	recovery
host sex	male
host subject id	BSS41

Description: Other isolates from this patient: BSN41.2, BSN41.3, BSN41.4

BioProject: PRJNA978117 Staphylococcus aureus
Retrieve all samples from this project

Submission: Wayne State University, Andrew Berti; 2023-12-10

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
ceftaroline	susceptible	==	0.5	mg/L	MIC		Biomérieux	E-Test	CLSI
clindamycin	susceptible	<=	0.5	mg/L	MIC	Phoenix	Becton Dickinson		CLSI
daptomycin	susceptible	<=	1	mg/L	MIC	Phoenix	Becton Dickinson		CLSI
erythromycin	resistant	>	4	mg/L	MIC	Phoenix	Becton Dickinson		CLSI
gentamicin	susceptible	<=	1	mg/L	MIC	Phoenix	Becton Dickinson		CLSI
linezolid	susceptible	==	2	mg/L	MIC	Phoenix	Becton Dickinson		CLSI
oxacillin	resistant	>	2	mg/L	MIC	Phoenix	Becton Dickinson		CLSI
rifampin	susceptible	<=	0.5	mg/L	MIC	Phoenix	Becton Dickinson		CLSI
trimethoprim-sulfamethoxazole	susceptible	<=	0.5/9.5	mg/L	MIC	Phoenix	Becton Dickinson		CLSI
vancomycin	susceptible	==	1	mg/L	MIC	Phoenix	Becton Dickinson		CLSI
vancomycin	susceptible	==	2	mg/L	MIC		Biomérieux	E-Test	CLSI

Accession:: SAMN38754069
ID:: 38754069

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Pathogen: clinical or host-associated sample from Staphylococcus aureus
Pathogen: clinical or host-associated sample from Staphylococcus aureus

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