Metagenome-assembled genome: SRP114822_co5_71

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Result Filters

Organism: uncultured Fluviicola sp.
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Crocinitomicaceae; Fluviicola; environmental samples

Attributes

broad-scale environmental context	aquatic
collection date	2016-08-01
environmental medium	aquatic
geographic location	Australia
investigation type	metagenome-assembled genome
isolation source	marine metagenome
project name	Marine amplicons from Australian marine (benthic and pelagic environments
sample name	SRP114822_co5_71
ENA first public	2024-12-11
ENA-CHECKLIST	ERC000047
INSDC center name	CMR
INSDC status	public
Submitter Id	SRP114822_co5_71
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaSPAdes;3.15.4;default
binning parameters	coverage and kmer
binning software	MetaBAT2;2.15;default
completeness score	85.05
completeness software	CheckM2;1.0.2;default
contamination score	6.35
geographic location (latitude)	-19.154109
geographic location (longitude)	146.6426
local environmental context	marine biome
metagenomic source	marine metagenome
sample derived from	SAMN08953403,SAMN08953401
scientific_name	uncultured Fluviicola sp.
sequencing method	Illumina HiSeq 2500
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8814430,SRR8814878 of study SRP114822.