MAG for uncultured Methanosarcinaceae archaeon

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Organism: uncultured Methanosarcinaceae archaeon
cellular organisms; Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; environmental samples

Attributes

broad-scale environmental context	Fields
collection date	2021-07-01
environmental medium	not collected
geographic location	Denmark
isolation source	soil
project name	Microflora Danica
sample name	MFD05942.bin.1.278
ENA first public	2024-12-25
ENA-CHECKLIST	ERC000011
External Id	SAMEA114825239
INSDC center name	Center for Microbial Communities
INSDC last update	2023-12-07T10:00:03Z
INSDC status	public
Submitter Id	MFD05942.bin.1.278
assembly quality	Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
binning parameters	Ensemble iterative binning using coverage and kmer
binning software	MetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score	98.53
completeness software	CheckM2
contamination score	1.53
geographic location (latitude)	56.7771
geographic location (longitude)	9.6177
local environmental context	Poales, grass
metagenomic source	soil metagenome
sample derived from	ERS16252363
scientific_name	uncultured Methanosarcinaceae archaeon
taxonomic identity marker	multi-marker approach

Description: HQ MAG for uncultured Methanosarcinaceae archaeon, recovered from an environmental sample from Denmark

BioProject: PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project