MIGS Cultured Bacterial/Archaeal sample from Bacte... - BioSample

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Result Filters

Organism: Bacteroides sp. D1
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; unclassified Bacteroides

Attributes

broad-scale environmental context	terrestrial biome [ENVO:00000446]
collection date	not determined
estimated size	5987000
strain	D1
latitude and longitude	not determined
source material identifiers	BEI HM-74
investigation type	bacteria_archaea
host taxonomy ID	9606 (9606)
local-scale environmental context	human-associated habitat [ENVO:00009003]
isolation and growth condition	not determined
project name	Bacteroides sp. D1
geographic location	not determined
reference for biomaterial	not determined
host	Homo sapiens
environmental medium	biological product [ENVO:02000043]
environmental package	missing
number of replicons	not determined
isolation source	gastrointestinal tract
project_type	Reference Genome
finishing strategy (depth of coverage)	Level 2: High-Quality Draft30.12x;209
misc_param: HMP body site	not determined
nucleic acid extraction	not determined
misc_param: HMP supersite	gastrointestinal_tract
assembly	Newbler v. 2.0.0-PostRelease-1/21/2009
sequencing method	454
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf