MIGS Cultured Bacterial/Archaeal sample from Haemo... - BioSample

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Result Filters

Identifiers: BioSample: SAMN00761805; Sample name: HMPREF1050; SRA: SRS281644

Organism: Haemophilus parahaemolyticus HK385
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus parahaemolyticus

Attributes

collection date	not determined
estimated size	2035000
isolation and growth condition	not determined
host	Homo sapiens
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
investigation type	missing
local-scale environmental context	human-associated habitat [ENVO:00009003]
host taxonomy ID	9606 (9606)
project name	Haemophilus parahaemolyticus HK385, NCTC 8479
geographic location	not determined
source material identifiers	NCTC 8479
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
number of replicons	not determined
strain	HK385
environmental package	missing
finishing strategy (depth of coverage)	Level 2: High-Quality Draft64x;85
project_type	Reference Genome
misc_param: HMP body site	not determined
nucleic acid extraction	not determined
assembly	Newbler v. 2.6
misc_param: HMP supersite	airways
sequencing method	Illumina HiSeq 2000
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf