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MIGS Cultured Bacterial/Archaeal sample from Candidatus Lokiarchaeum sp. GC14_75

Identifiers
BioSample: SAMN03002197; Sample name: Loki_GC14_75_Lokiarchaeum; SRA: SRS687934
Organism
Candidatus Lokiarchaeum sp. GC14_75
cellular organisms; Archaea; Promethearchaeati; Promethearchaeota; Promethearchaeia; Promethearchaeales; Promethearchaeaceae; Candidatus Lokiarchaeum; unclassified Candidatus Lokiarchaeum
Package
MIGS: cultured bacteria/archaea, sediment; version 6.0
Attributes
broad-scale environmental contextsea floor
alkalinity3.15
magnesium50.5 mM
potassium9.3 mM
latitude and longitude73.763167 N 8.464000 E
sample storage locationUppsala/Bergen
depth0.73 mbsf
sample typemetagenomic assembly
dissolved hydrogen0
isolation sourceLoki's castle hydrothermal vent sediment
nitrate0
environmental mediummarine sediment
bromide405 µM
altitude-3283 m
calcium10.9 mM
sediment typelithogenous
sample size10 ml
methane0
pH7.66
metagenome sourcemarine sediment metagenome
collection date2010
silicate85 µM
sample collection device or methodGravity core
organic carbon0.5 w/w
geographic locationArctic Ocean: Gakkel Ridge
chloride589 mM
organism count5 x 10^6
ammonium34.66 mM
sodium443 mM
temperature-0.1¡C
sulfate29.9 mM
local-scale environmental contextHydrothermal impacted sediments
dissolved oxygen0
elevation3283 mbs
sulfide0
isolateGC14_75
nitrite0
isolation and growth conditionmissing
number of repliconsmissing
reference for biomaterialmissing
strainmissing
metagenomicTRUE
sediment_type descriptionHemipelagic hydrothermal influenced
noteThis biosample is a metagenomic assembly obtained from the marine sediment metagenome BioSample: SAMN03002196.
environmental-sampleTRUE
Description

Loki's castle core GC14, 75 cmbsf, reassembly of Lokiarchaeum

Keywords: GSC:MIxS;MIGS:6.0

BioProject
PRJNA259156 marine sediment metagenome
Retrieve all samples from this project

Submission
Uppsala University, Lionel Guy; 2014-08-22
Accession:
SAMN03002197
ID:
3002197

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